You don't need the stereo feature.
Just point the first (upper) camera down, with flash on and with MD script.
The flash of the first camera will trigger the second camera.
The rest is a matter of finding the right parameters.
Is a expensive solution, but I believe it will work.
Why you don't try just one camera, focus fixed to macro, and a sequence of water drops.
I'm sure you will get the camera triggered by the first drop, and the second one will be in focus.
You just have to find the right parameters, and a little bit patience.
Good luck.