I don't know what it is exactly that you are trying to accomplice but to get 3 stacks with a 2EV exposure difference between them, I used the following settings:
In Canon menu, set to continuous mode.
In Timelapse script use the following settings:
Number of repeats 1
Endless mode N/Y 0
Single/Cont/Time/Burst 1
Tv exposures 3
Focus exposures 1
Bracket Tv/foc/Both 2
Light/Dark/Alternate 2
Num of 1/3 EV steps 6
Equal/auto/digi 0/2 1
Focus-step 50
digiscope focus ref 500
Blank screen N/Y 0
Shutdown N/auto/USB 0
Save stack N/Y 1
Sunrise mode 0
TXT/CSV 0
These are the resulting stacks, stacked with a trail version of Helicon Focus
And these are the saved stack files:
---------------------------------------------------------------------------
Auto focus bracketing with Tv bracketing
Continuous shooting mode
Time 11:23:28
Focal length 5.9
Aperture 3.2
Tv bracket 1/20
Focused distances (from front of lens)
and step size
86 0
92 6
99 7
108 9
119 11
132 13
149 17
172 23
203 31
250 47
326 76
471 145
855 384
4774 3919
Inf 60761
---------------------------------------------------------------------------
Auto focus bracketing with Tv bracketing
Continuous shooting mode
Time 11:23:50
Focal length 5.9
Aperture 3.2
Tv bracket 1/5
Focused distances (from front of lens)
and step size
86 0
92 6
99 7
108 9
119 11
132 13
149 17
172 23
203 31
250 47
326 76
471 145
855 384
4774 3919
Inf 60761
---------------------------------------------------------------------------
Auto focus bracketing with Tv bracketing
Continuous shooting mode
Time 11:24:14
Focal length 5.9
Aperture 3.2
Tv bracket 1/80
Focused distances (from front of lens)
and step size
86 0
92 6
99 7
108 9
119 11
132 13
149 17
172 23
203 31
250 47
326 76
471 145
855 384
4774 3919
Inf 60761
Frans